Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928502.1_cds_XP_016476042.1_67916
CDS Infomation

[gene=LOC107797654] [db_xref=GeneID:107797654] [protein=zeaxanthin epoxidase, chloroplastic] [protein_id=XP_016476042.1] [location=join(3448..3950,4514..4676,4865..4939,5141..5241,5360..5475,6898..7109,7624..7715,8029..8143,8240..8343,8795..8840,8971..9035,9133..9219,9612..9666,9782..9870,9949..10036,10129..10212)] [gbkey=CDS]
Sequence

ATGTATTCAACTGTGTTTTACAATTCAGTTCATCCATCCACTTCAGTTTTTTCAAGAAAG
CAGCTGCCTTTATTGATCTCTAAGGATTTCCCTGCAGAATTGTGTCATTCTTTACCATGT
AGTAGAAACTTGGAAAATGGTCAAATCAAGAAAGTCAAAGGAGCAGTAAAAGCCACAATA
GCTGAAGCTCCAGCTACTATTCCTACAACTGATTTGAAAAAGGTTCCACAGAAGAAGTTG
AAAGTACTAGTAGCAGGTGGTGGGATTGGAGGGTTAGTTTTTGCATTGGCTGCAAAGAAA
AGGGGATTTGATGTGTTGGTATTTGAGAGGGATTTAAGTGCTATTAGAGGAGAAGGGCAA
TATAGAGGACCAATTCAGATACAGAGCAATGCATTGGCTGCTTTGGAAGCAATTGACATG
GATGTTGCTGAAGACATAATGAATGCTGGTTGCATCACTGGTCAAAGGATTAATGGTTTG
GTTGATGGTGTCTCTGGTAACTGGTATTGCAAGTTTGATACGTTTACTCCAGCAGTGGAA
CGCGGACTTCCTGTGACAAGAGTCATCAGCCGCATGACTTTGCAGCAGATCCTTGCACGT
GCTGTTGGGGAGGATATAATTATGAATGAAAGTAATGTAGTGAACTTTGAGGATGATGTT
GAAAAGGTTACTGTGACTCTTGAGGATGGACAGCAGTATTCAGGTGATCTTCTGGTTGGT
GCTGATGGCATAAGGTCTAAGGTAAGGACTAATTTGTTCGGACCCAGTGATGTAACTTAC
TCTGGCTACACTTGTTACACTGGAATTGCAGATTTTGTTCCTGCTGATATTGAGACAGTT
GGGTACCGAGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGTGGAGGC
AAGATGCAGTGGTATGCATTTCACAATGAACCAGCTGGCGGTGTGGATGATCCAAATGGT
AAAAAGGCAAGATTGCTTAAAATATTTGAGGGGTGGTGTGACAATGTTATAGACCTATTA
GTTGCTACAGATGAAGATGCAATTCTTCGACGTGACATCTATGATAGACCGCCAACCTTT
AATTGGGGAAAAGGTCGTGTTACATTGCTTGGGGACTCTGTCCATGCTATGCAGCCTAAT
TTGGGTCAAGGGGGATGCATGGCCATAGAGGATGGCTATCAACTAGCACTGGAACTTGAT
AAAGCATTGAGCCGAAGTGCCGAGTCAGGAACCCCTGTGGATATCATCTCATCTTTAAGG
AGCTATGAAAGTTCTAGAAAACTTCGAGTTGGAGTTATCCATGGACTGGCTAGAATGGCT
GCAATCATGGCATCAACTTACAAGGCTTATCTTGGCGTCGGACTCGGTCCATTATCATTT
TTGACCAAGTTTAGGATACCACATCCTGGAAGAGTTGGTGGAAGATTTTTTATTGACTTG
GGAATGCCGCTTATGTTAAGCTGGGTTCTAGGAGGCAACGGTGAAAAGCTTGAAGGCAGA
ATACAACATTGCAGGCTATCTGAGAAAGCAAATGACCAATTGAGAAATTGGTTTGAAGAT
GATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGGCTACTGCTTCCTGCTGGGAATAGC
AATGCTGATTTAGAAACTCTTGTTTTAAGCAGAGATGAGAACATGCCTTGCACTATTGGG
TCTGTCTCACATACAAACATTCCTGGAAAATCAGTAGTTATACCTTTGCCTCAGGTGTCC
CAAATGCATGCCCGGATATCCTACAAAGGTGGAGCATTTTTTGTAACTGATTTACGAAGT
GAACATGGTACCTGGATTACGGATAACGAAGGCAGAAGATACCGAGCGTCTCCAAACTTT
CCTACTCGCTTTCATCCGTCAGATATTATTGAATTTGGTTCTGATAAAAAGGCAGCATTT
CGCGTAAAGGTAATGAAATTTCCTCCAAAAACTGCTGCAAAGAAGGAAGAGCGTCAAGCA
GTGGGGGCAGCTTGA

Peptide Sequence

PEP ID

XP_016476042.1
PEP Infomation

PREDICTED: zeaxanthin epoxidase, chloroplastic [Nicotiana tabacum]
Sequence

MYSTVFYNSVHPSTSVFSRKQLPLLISKDFPAELCHSLPCSRNLENGQIKKVKGAVKATI
AEAPATIPTTDLKKVPQKKLKVLVAGGGIGGLVFALAAKKRGFDVLVFERDLSAIRGEGQ
YRGPIQIQSNALAALEAIDMDVAEDIMNAGCITGQRINGLVDGVSGNWYCKFDTFTPAVE
RGLPVTRVISRMTLQQILARAVGEDIIMNESNVVNFEDDVEKVTVTLEDGQQYSGDLLVG
ADGIRSKVRTNLFGPSDVTYSGYTCYTGIADFVPADIETVGYRVFLGHKQYFVSSDVGGG
KMQWYAFHNEPAGGVDDPNGKKARLLKIFEGWCDNVIDLLVATDEDAILRRDIYDRPPTF
NWGKGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLALELDKALSRSAESGTPVDIISSLR
SYESSRKLRVGVIHGLARMAAIMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDL
GMPLMLSWVLGGNGEKLEGRIQHCRLSEKANDQLRNWFEDDDALERATDAEWLLLPAGNS
NADLETLVLSRDENMPCTIGSVSHTNIPGKSVVIPLPQVSQMHARISYKGGAFFVTDLRS
EHGTWITDNEGRRYRASPNFPTRFHPSDIIEFGSDKKAAFRVKVMKFPPKTAAKKEERQA
VGAA

Transcript Sequence

Gene sequence data has not been registered.